get app

    Learn Bioinformatics From Scratch (Theory & Practical)

    BY
    Udemy

    Brochure Enquire
    Mode

    Online

    Fees

    ₹ 499 3099

    Quick Facts

    particular details
    Medium of instructions English
    Mode of learning Self study
    Mode of Delivery Video and Text Based

    Course and certificate fees

    Fees information
    ₹ 499  ₹3,099
    certificate availability

    Yes

    certificate providing authority

    Udemy

    The syllabus

    Module 1 Databases

    • Definition of Databases
    • Database Design
    • Knowledge Discovery
    • Biological Databases
    • Take Home Key Points
    • Practical -1: NCBI Nucleotide Database
    • Practical-2: Protein Databank (PDB)
    • Quiz 1
    • Assignment 1

    Module 2 Sequence Alignment

    • What is Sequence Alignment?
    • Some Important Terms
    • Types of Sequence Alignment
    • What is Algorithms?
    • Dot Matrix Algorithm; How Does It Work?
    • Dot Matrix Algorithm; How to Interpret The Results?
    • Dot Matrix Algorithm; Identification of Repeat Sequences
    • Dot Matrix Algorithm; Advantages Vs Disadvantages
    • Practical-3: DotMatcher for Qualitative Comparison of Sequence
    • Assignment 2
    • Dynamic Programming Method: How Does It Work?
    • How to Transform Scoring Matrix to Alignment?
    • Dynamic Programming; Some Important Terms to Understand
    • Comparison Between DotMatrix and Dynamic Programming
    • Practical-4: Global Pairwise Sequence Alignment Using DNA Sequences
    • Practical-5: Pairwise Sequence Alignment Using Protein
    • Practical-6: Local Pairwise Sequence
    • Assignment 3
    • Introduction to Database Searching; BLAST
    • Type of Algorithms
    • How Does Word Algorithm Work? (Part-1)
    • How Does Word Algorithm Work? (Part-2)
    • A Important Term For Word Algorithm
    • Important Statistical Values to Evaluate the BLAST Results
    • Different Type of BLAST Associated with NCBI Databases
    • Practical -7: How to Use BLAST Program
    • Assignment 4
    • Optional: How to Use PSI-BLAST
    • Multiple Sequence Alignment; An Introduction
    • Algorithms for Multiple Sequence Alignment
    • Progressive Sequence Alignment Algorithm
    • Tools for Multiple Sequence Alignment
    • Practical -8: How to Use CLUSTAL-W
    • Practical -9: How to Use T-COFFEE
    • Assignment 5
    • Quiz 2

    Section 3 : Genomic Bioinformatics

    • Introduction of Module 3
    • What is DNA?
    • Where Is Our DNA is Located?
    • What Is Role of DNA?
    • What Does Gene Have?
    • Algorithms for Gene Prediction-1
    • Algorithms for Gene Prediction-2
    • GC-Bias and Test Code; An Ab-initio Type of Algorithm
    • Introduction of Markov Model (Part-1)
    • Introduction of Markov Model (Part-2)
    • Machine Learning and Gene Prediction
    • Practical-10: Prediction of Prokaryotic Gene
    • Practical-10.1 Prediction of Prokaryotic Regulatory Elements
    • Practical-11 Prediction of Eukaryotic Gene
    • Assignment 6
    • Assignment 7
    • Quiz 3

    Module 4 : Structural Bioinformatics

    • What is Protein? (Part-1)
    • What is Protein? (Part-2)
    • Some Important Points
    • Role of Amino Acids in 3D Structure
    • Peptide Bond; A link between Amino Acids
    • Secondary Structures of Proteins
    • Double Bond like Character in Peptide Bond & Ramachandran Plot
    • Forces Stabilizing The Protein Structure
    • Practical 13: Visualization of Protein Structure in Pymol (Part-1)
    • Why Protein Structure Prediction is So Important?
    • Protein Secondary Structure Prediction Algorithms (Part-1)
    • Protein Secondary Structure Prediction Algorithms (Part-2)
    • Practical-15: Prediction of Globular Protein Secondary Structure
    • Assignment 8
    • Algorithm for Secondary Structure Prediction of Transmembrane Proteins
    • Practical-16: Prediction of Transmembrane Helix Secondary Structure
    • Assignment 9
    • 3D Structure Prediction Algorithms
    • Homology Based Algorithm (Part-1)
    • Homology Based Algorithm (Part-2)
    • Homology Based Algorithm (Part-3)
    • Homology Based Algorithm (Part-4)
    • Model Validation & Draw back of Homology Based Algorithm
    • Practical-17: Prediction of 3D structure Using Homology Modeling (Mdeller)
    • Assignment 10
    • Threading Algorithm for 3D Structure Prediction
    • Practical-18: Prediction of 3D structure Using Threading Technique (I-TASSER)
    • Assignment 11
    • (Optional) Practical-18.1: Use of InterPro
    • (Optional) Practical 20: How to Perform Docking easily Using Vina
    • (Optional) Practical-21: How to Analyze the Docking Data
    • (Optional) Practical 3: ZINC Database for Drug Searching
    • Quiz 4
    • (Very Important) Practical Learn How to Use Alpha-Fold
    • Update Another GOR-IV Server for Secondary Structure Predictions

    Module 4 : Evolutionary Bioinformatics

    • What is Evolution and Phylogenetics
    • Some Important Terms To Understand Phylogenetic Tree
    • Different Type of Phylogenetic Trees
    • Steps To Construct Phylogenetic Tree
    • Selection of Molecular Marker for Tree Construction
    • Alignment for Tree Construction
    • Evolutionary Model Selection
    • Methods To Construct Tree
    • Validation of Tree By Bootstrapping
    • Practical -19: Building Phylogenetic Tree
    • Assignment 12
    • Quiz 5

    Module 6 (Optional)

    • Practical-22: How to Install Linux in Window for Bioinformatics Analysis
    • Practical-23: How to Install Gromacs in Windows
    • Practical-24: How to Download Chemsketch
    • Practical-25: Ligand Drawing and Making of Ligand 3D Structure

    Instructors

    Dr Muhammad Dujana

    Dr Muhammad Dujana
    Instructor
    Freelancer

    Ph.D

    Trending Courses

    Digital Marketing Courses Fashion Design Courses Data Science Courses Interior Design Courses Graphic Designing Courses Cyber Security Courses Nursing Courses Tally Courses Data Analysis Courses Web Designing Courses Artificial Intelligence Courses Ethical Hacking Courses Free Digital Marketing Courses And certifications Free Artificial Intelligence Courses And Certifications Free Data Analysis Courses And Certifications Free Cyber Security Courses And Certifications Free Data Science Courses And Certifications Free Cloud Computing Courses And Certifications Free Python Courses And Certifications Free Fashion And Textiles Courses And Certifications Free Graphic Designing Courses And Certifications Free Web Designing Courses And Certifications

    Popular Courses

    General Management Courses Public Health Courses Teaching and Education Courses Financial Management Courses Web Development Courses Mathematics Courses Data Science Courses Cyber Security Courses Programming Courses Digital Marketing Courses Law Courses Leadership Courses Explore all courses

    Popular Platforms

    upGrad Courses Udemy Courses Edx Courses Swayam Courses Coursera Courses Futurelearn Courses Mindmajix Technologies Courses Vskills Courses IIT Kharagpur Courses Emeritus Courses IIT Kanpur Courses NPTEL Courses Explore all platforms

    Learn more about the Courses

    10 Reasons to Enrol Yourself in a Digital Marketing Course 8 Must-Have Skills for AWS Cloud Architects Planning to Upskill Yourself? Enrol for a Program in Data Science 25+ Tips for Improving Your Graphic Design Skills Top Universities in India Offering Cyber Security Courses 15+ Courses for Learning Data Mining How to Make a Career in the Field of Artificial Intelligence Top 10 Benefits Of Holding A Certification In Business Intelligence Which are the best certification courses for Photography in India A Beginner's Guide to Pursue Python Programming Want to Pursue a Career in Blockchain Technology? Here is all that you need to Know How Entrepreneurs Can Use Machine Learning to Make their Business Successful? The Scope of Artificial Intelligence in India Top 10 Online Courses for Travel Lovers 10 Best Certification Courses After Hospital and Healthcare Management
    Providers
    Close

    Download the Careers360 App on your Android phone

    Regular exam updates, QnA, Predictors, College Applications & E-books now on your Mobile

    Careers360 App
    150M+ Students
    30,000+ Colleges
    500+ Exams
    1500+ E-books