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Quick Facts

Medium Of InstructionsMode Of LearningMode Of Delivery
EnglishSelf StudyVideo and Text Based

Courses and Certificate Fees

Fees InformationsCertificate AvailabilityCertificate Providing Authority
INR 12572yesUC San Diego

The Syllabus

  • Welcome!
  • Lectures (Optional)
  • Interactive Text (Powered by Stepik)
  • Programming Assignment 1: Generate Contigs from a Collection of Reads
  • Programming Assignment 2: Reconstruct a String from its Genome Path
  • Programming Assignment 3: Construct the Overlap Graph of a Collection of k-mers
  • Programming Assignment 4: Construct the de Bruijn Graph of a String
  • Programming Assignment 5: Construct the de Bruijn Graph of a Collection of k-mers

  • Lectures (Optional)
  • Interactive Text (Powered by Stepik ) 
  • Programming Assignment 6: Find an Eulerian Cycle in a Graph
  • Programming Assignment 7: Find an Eulerian Path in a Graph
  • Programming Assignment 8: Reconstruct a String from its k-mer Composition
  • Programming Assignment 9: Find a k-Universal Circular String

  • Lectures (Optional)
  • Interactive Text (Powered by Stepik )
  • Optional Assignment 1: Construct a String Spelled by a Gapped Genome Path
  • Programming Assignment 10: Reconstruct a String from its Paired Composition
  • Optional Assignment 2: Generate All Maximal Non-Branching Paths in a Graph
  • Programming Assignment 11: Generate Contigs from a Collection of Reads

Instructors

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