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Quick Facts
| Medium Of Instructions | Mode Of Learning | Mode Of Delivery |
|---|---|---|
| English | Self Study | Video and Text Based |
Courses and Certificate Fees
| Fees Informations | Certificate Availability | Certificate Providing Authority |
|---|---|---|
| INR 12594 | yes | UC San Diego |
The Syllabus
- From Genome Sequencing to Pattern Matching
- Programming Assignments
- Programming Assignment 1-1: Construct a Trie from a Collection of Patterns
- Programming Assignment 1-2: Implement TrieMatching
- Programming Assignment 1-3: Extend TrieMatching
- Programming Assignment 1-4: Suffix Tree
- Programming Assignment 1-5: Shortest Non-Shared Substring
- Burrows-Wheeler Transform
- Suffix Arrays
- Approximate Pattern Matching and Mutations of the Genome
- Slides and External References
- Programming Assignment 2-1: Burrows-Wheeler Transform
- Programming Assignment 2-2: Reconstruct String from Burrows-Wheeler Transform
- Programming Assignment 2-3: Implement BetterBWMatching
- Programming Assignment 2-4: Construct Suffix Array of a String
- Knuth-Morris-Pratt Algorithm
- Suffix Array Construction
- From Suffix Array to Suffix Tree
- Programming Assignment 3-1: Find all Occurrences of a Pattern in a String
- Programming Assignment 3-2: Construct Suffix Array of a Long String
- Programming Assignment 3-3: Pattern Matching with the Suffix Array
- Programming Assignment 3-4: Construct a Suffix Tree from a Suffix Array
- Preparing for Final Exam
- Practice Exam
- Final Exam
Instructors
Articles
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1 Sep'23, 07:11 AM
31 Aug'23, 02:07 PM
26 Aug'23, 11:14 AM
21 Aug'23, 07:18 AM
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6 Jul'23, 07:27 AM
21 Jun'23, 12:18 PM
13 Jun'23, 09:54 AM
4 Apr'23, 11:39 AM
27 Mar'23, 07:53 AM
22 Mar'23, 12:57 PM
22 Mar'23, 11:00 AM
4 Sep'23, 06:14 AM
1 Sep'23, 12:44 PM
1 Sep'23, 12:27 PM
1 Sep'23, 12:02 PM
1 Sep'23, 11:26 AM
1 Sep'23, 09:57 AM
1 Sep'23, 08:48 AM
1 Sep'23, 07:11 AM
31 Aug'23, 02:07 PM
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