Dear Aspirant
In general, irrespective of your graduation degree specialization you can attempt any paper in gate.so try going through the syllabus of both EE and EC papers and choose one based on the subject familiarity of respective papers with your current Graduate studies.

To analyse the syllabus visit:
https://engineering.careers360.com/articles/gate-syllabus

Hope this helps you out
All the best

Dear Aspirant,
EE AND ECE two branches of engineering are very similar to each other. In ELECTRICAL ENGINEERING you will study about Power System, Electrical Machines, Network Circuit Theory, etc. In ELECTRONICS AND COMMUNICATION ENGINEERING you will learn about Digital and Analog Electronics, Analog and Digital communication, Microprocessors and Microcontrollers, Signal Systems, etc.
From a job perspective in most of the PSUs, hire ELECTRICAL ENGINEERING and ELECTRICAL AND ELECTRONICS ENGINEERING students for similar positions for that job.
All the best.

JNEC Aurangabad

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