Dear student,

As your have paid the seat acceptance fees, and uploaded documents except medical certificate then it can create a problem for you.

Because on the official site of josaa under the section of INSTRUCTIONS TO CANDIDATES, it is clearly written that you have to submit medical certificate. If you have not submitted this then the verifying officers might raise a query against you. And you have to reply them. As you have not uploaded medical certificate then they might ask.
In case the query has not been responded the allotted seat may get cancelled.
But take a 50 - 50 chances that your alloted seat may get cancelled.

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