Hey Athulya.
The best colleges for MCA in their particluar order are :

1. NIT Trichy/ Surathkal

2. NIT Warrangal/Allahabad

3. BIT Mesra

4. Hyderabad Central University/ JNU, delhi

5. NIT Calicut/ Kurukshetra

6. NIT Bhopal/ IT BHU

7. NIT Durgapur

8. Pune University

9. VIT, vellore

IIT Roorkee would have been in top 2, but they have stopped admissions to the MCA programme.
There are numerous specialisations in MCA. You have to choose your specialisation in the last year/semester according to your interest. Some specialistlations are:
Systems Management
Management Information Systems (MIS)
Systems Development
Systems Engineering
Networking
Internet working
Application Software
Software Development
Troubleshooting
Hardware Technology
You must choose your specialisation wisely and according to your interest. Do your research work properly before opting it.

Hope this helps. All the best.

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