hi,
see there is various careers prospect available after completing your m.sc in medical microbiology.
you can be a lecturer in college or school
you may work as an medical representative ,
now a days there is various research going on medicines manufacturing from aloevera and other natural plants, so you may work as an microbiologist.
in research institute there is need for lab technician on various prospects, in microbiology department you may work as an lab technician.
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